STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET0880Transcriptional regulator, LuxR family. (164 aa)    
Predicted Functional Partners:
DET0881
Conserved domain protein; Identified by similarity to GP:601880.
       0.773
DET0879
Identified by match to protein family HMM PF01844.
       0.546
DET0878
Conserved domain protein; Identified by similarity to GP:6690145.
       0.535
DET0954
Hsp20/alpha crystallin family protein; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.529
DET0882
DNA binding protein, excisionase family; Identified by match to protein family HMM TIGR01764.
       0.491
DET0883
Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
       0.491
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.