STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET0916Conserved hypothetical protein; Identified by similarity to OMNI:NTL02MA0630. (302 aa)    
Predicted Functional Partners:
DET0915
Hypothetical protein; Identified by Glimmer2; putative.
   
   0.805
cetZ
GTPase domain, tubulin/FtsZ family protein; Involved in cell shape control; Belongs to the CetZ family.
  
     0.572
DET0352
Conserved hypothetical protein; Identified by similarity to GB:BAC73118.1.
  
     0.567
DET0114
ABC transporter, substrate-binding protein, putative; Identified by similarity to SP:P46904.
  
     0.537
DET0845
ATP phosphoribosyltransferase, putaitve; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.
  
     0.505
DET0336
DNA-binding protein, putative.
  
     0.498
cetZ-2
GTPase domain, tubulin/FtsZ family protein; Involved in cell shape control; Belongs to the CetZ family.
  
     0.475
hisZ
histidyl-tRNA synthetase, putative; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.
  
     0.471
DET0755
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.450
DET0917
Hypothetical protein; Identified by Glimmer2; putative.
       0.446
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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