STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET0946AMP-binding protein. (630 aa)    
Predicted Functional Partners:
DET1033
long-chain-fatty-acid--CoA ligase, putative; Identified by similarity to SP:P29212.
 
 
 0.963
DET0938
High-affinity branched-chain amino acid ABC transporter, ATP-binding protein; Identified by similarity to SP:P22730.
    0.901
DET0944
High-affinity branched-chain amino acid ABC transporter, permease protein, putative; Identified by similarity to SP:P22729; Belongs to the binding-protein-dependent transport system permease family.
 
    0.889
DET0941
High-affinity branched chain amino acid ABC transporter, ATP-binding protein; Identified by similarity to SP:P21630.
    0.882
DET0945
High-affinity branched-chain amino acid ABC transporter, permease protein, putative; Identified by similarity to SP:P08340; Belongs to the binding-protein-dependent transport system permease family.
 
    0.867
DET0940
AMP-binding enzyme.
 
    0.795
DET0943
Lipoprotein, putative.
 
    0.783
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.699
DET0942
Lipoprotein, putative.
 
    0.663
DET1513
ATPase, AAA family protein; Belongs to the AAA ATPase family.
    
  0.630
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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