STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET1002Glycosyl transferase, group 1 family protein; Identified by similarity to OMNI:NTL01CG0396. (405 aa)    
Predicted Functional Partners:
gmhA
Phosphoheptose isomerase; Identified by similarity to SP:Q9AGY7.
   
 0.914
DET1001
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01PA1525.
 
  
 0.882
DET1003
Hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.816
DET0202
Histidinol-phosphate phosphatase family protein/glycosyl transferase, group 2 family protein; Identified by match to protein family HMM TIGR01656; match to protein family HMM TIGR01662.
 
  
 0.658
DET1141
Glycosyl transferase/polysaccharide deacetylase family protein; Identified by match to protein family HMM PF01522.
    
 0.557
DET1005
Transcriptional regulator, ArsR family.
       0.534
DET1006
Permease, putative.
       0.534
DET1007
Identified by match to protein family HMM TIGR00412.
  
  
 0.502
secG
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
   
 0.482
DET0209
Membrane protein, putative.
 
  
 0.479
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.