STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET1068Site-specific recombinase, phage integrase family, truncation. (138 aa)    
Predicted Functional Partners:
DET1069
Site-specific recombinase, phage integrase family.
 
     0.946
DET1067
Site-specific recombinase, phage integrase family.
 
     0.943
DET1090
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.757
DET1091
Virulence-related protein; Identified by similarity to GP:3482866.
  
     0.723
DET0065
Virulence-related protein; Identified by similarity to GP:3482866.
  
     0.711
DET1071
Holin; Identified by match to protein family HMM PF05105; match to protein family HMM TIGR01593.
 
     0.584
DET1089
Virulence-related protein; Identified by similarity to GP:3482867.
  
    0.572
DET1103
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.528
DET1095
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.508
DET1070
Endolysin, putative; Identified by match to protein family HMM PF01183.
 
     0.472
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.