STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET1090Hypothetical protein; Identified by Glimmer2; putative. (74 aa)    
Predicted Functional Partners:
DET1091
Virulence-related protein; Identified by similarity to GP:3482866.
 
     0.949
DET1089
Virulence-related protein; Identified by similarity to GP:3482867.
 
    0.947
DET1095
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.824
DET0065
Virulence-related protein; Identified by similarity to GP:3482866.
 
     0.784
DET1068
Site-specific recombinase, phage integrase family, truncation.
  
    0.757
DET1093
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.750
DET1103
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.707
DET0073
Conserved hypothetical protein; Identified by similarity to OMNI:AF2353.
  
     0.676
DET0070
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.656
DET1092
DNA methylase.
  
    0.655
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.