STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET1103Hypothetical protein; Identified by Glimmer2; putative. (108 aa)    
Predicted Functional Partners:
DET1102
Conserved hypothetical protein; Identified by similarity to OMNI:EF0319.
 
     0.943
DET1101
Conserved hypothetical protein; Identified by similarity to GP:18920552.
 
     0.939
tyrA
Chorismate mutase/prephenate dehydratase.
  
  
 0.768
DET1091
Virulence-related protein; Identified by similarity to GP:3482866.
  
     0.752
DET1100
DNA-dependent DNA polymerase, family A.
 
   
 0.743
DET1090
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.707
DET1095
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.702
DET0065
Virulence-related protein; Identified by similarity to GP:3482866.
  
     0.683
DET0073
Conserved hypothetical protein; Identified by similarity to OMNI:AF2353.
 
   
 0.682
gatC
glutamyl-tRNA(gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
  
    0.657
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.