STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET1126Transcriptional regulator; Identified by similarity to SP:Q05943. (223 aa)    
Predicted Functional Partners:
DET0136
Sensory box sensor histidine kinase; Identified by similarity to OMNI:NTL01BH3159; match to protein family HMM TIGR00229.
  
 0.935
DET1523
Response regulator.
  
     0.774
DET0300
DNA-binding response regulator.
  
     0.771
DET0316
DNA-binding response regulator.
  
     0.768
DET0170
DNA-binding response regulator.
  
     0.763
DET0304
Response regulator.
  
     0.760
DET1540
DNA-binding response regulator; Identified by similarity to SP:P21866.
  
     0.759
DET0232
DNA-binding response regulator.
  
     0.748
DET1127
Conserved hypothetical protein; Identified by similarity to OMNI:TM0394.
       0.714
gltB
Glutamate synthase, alpha subunit, putative; Belongs to the glutamate synthase family.
     
 0.714
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.