STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET1159Molybdenum ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF03459; Belongs to the ABC transporter superfamily. (368 aa)    
Predicted Functional Partners:
modB
Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 0.998
modA
Molybdenum ABC transporter, periplasmic molybdate-binding protein; Identified by similarity to SP:P37329; match to protein family HMM TIGR01256.
  
 0.978
DET1491
Peptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
 
    
0.907
DET0024
DNA internalization-related competence protein ComEC/Rec2; Identified by match to protein family HMM TIGR00360; match to protein family HMM TIGR00361.
  
  
 0.635
DET0418
Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM TIGR01726.
 
 
  
 0.522
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein.
       0.458
DET1156
Nitrogen regulatory protein P-II; Identified by match to protein family HMM PF00543; Belongs to the P(II) protein family.
       0.415
DET1157
Nitrogen regulatory protein P-II; Identified by similarity to SP:Q50786.
       0.415
nifD
Nitrogenase molybdenum-iron protein alpha chain; Identified by similarity to SP:P00467; match to protein family HMM TIGR01282; match to protein family HMM TIGR01862; Belongs to the NifD/NifK/NifE/NifN family.
       0.410
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.