Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DET1176Fec-type ABC transporter, ATP-binding protein. (272 aa)    
Predicted Functional Partners:
DET1174
Fec-type ABC transporter, periplasmic iron-binding protein; Identified by match to protein family HMM PF01497.
 
 
 0.989
DET1175
Fec-type ABC transporter, permease protein; Identified by similarity to GP:17063216; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.981
DET1491
Peptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
 
     
0.897
DET0651
ABC-type cobalamin/Fe3+-siderophores transport systems, permease component; Identified by similarity to PIR:S54438; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.892
DET0685
ABC-type cobalamin/Fe3+-siderophores transport systems, permease component; Identified by similarity to PIR:S54438.
 
 0.892
DET1173
Identified by match to protein family HMM PF02663.
 
    0.806
DET1490
Peptide ABC transporter, ATP-binding protein.
 
     
0.726
DET0418
Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM TIGR01726.
 
    
 0.651
DET0250
Iron ABC transporter, periplasmic iron-binding protein, putative; Identified by similarity to OMNI:NTL01TT0342.
  
 
 0.554
DET0650
ABC-type cobalamin/Fe3+-siderophores transport systems, periplasmic binding protein, putative; Identified by similarity to OMNI:NTL01TT0342.
  
 
 0.554
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.