STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acsacetyl-CoA synthetase; Identified by similarity to SP:P27095. (652 aa)    
Predicted Functional Partners:
porA
Pyruvic-ferredoxin oxidoreductase, alpha subunit; Identified by similarity to SP:Q51804.
  
 
 0.921
DET0825
2-isopropylmalate synthase/homocitrate synthase family protein; Identified by match to protein family HMM TIGR00977; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.919
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
  
 
 0.919
oadA
Oxaloacetate decarboxylase, alpha subunit; Identified by similarity to SP:Q03030; match to protein family HMM PF02436; match to protein family HMM TIGR01108.
    
 0.917
porB
Pyruvic-ferredoxin oxidoreductase, beta subunit; Identified by similarity to SP:Q51805.
  
 
 0.915
porD
Pyruvic-ferredoxin oxidoreductase, delta subunit; Identified by similarity to SP:Q51803.
   
 
 0.913
porG
Pyruvic-ferredoxin oxidoreductase, gamma subunit; Identified by similarity to SP:Q51799.
  
 
 0.911
acsC-1
Corrinoid/iron-sulfur protein, large subunit; Identified by similarity to SP:Q07340.
   
 
 0.909
acsD-1
Corrinoid/iron-sulfur protein, small subunit; Identified by similarity to SP:Q07341.
   
 
 0.907
acyP
Acylphosphatase, putative; Identified by match to protein family HMM PF00708.
     
  0.900
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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