STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET1295Hypothetical protein; Identified by Glimmer2; putative. (369 aa)    
Predicted Functional Partners:
DET0352
Conserved hypothetical protein; Identified by similarity to GB:BAC73118.1.
  
     0.636
DET0114
ABC transporter, substrate-binding protein, putative; Identified by similarity to SP:P46904.
  
     0.631
DET0754
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.597
DET0755
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.579
DET0622
Radical SAM domain protein.
  
     0.564
DET0115
ABC transporter, permease protein, putative; Identified by similarity to SP:P75774; similarity to OMNI:NTL01BMA0802.
  
     0.516
DET0108
Identified by match to protein family HMM PF03372.
  
     0.490
DET1358
Type IV pilus assembly family protein; Identified by similarity to OMNI:NTL03PA05045.
  
     0.467
nnrE
Carbohydrate kinase family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repa [...]
       0.442
DET1294
DNA-binding response regulator; Identified by match to protein family HMM TIGR01764.
 
     0.420
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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