STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET1452Conserved hypothetical protein; Identified by similarity to OMNI:NTL03CP0412. (133 aa)    
Predicted Functional Partners:
pepA
Cytosol aminopeptidase family protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
     
  0.900
cysK
Cysteine synthase A; Identified by match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
  0.815
DET0755
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.631
DET1090
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.607
DET0065
Virulence-related protein; Identified by similarity to GP:3482866.
 
     0.596
DET1451
Hypothetical protein; Identified by Glimmer2; putative.
       0.501
DET0754
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.452
DET1089
Virulence-related protein; Identified by similarity to GP:3482867.
 
    0.426
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.