STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET1499Conserved hypothetical protein; Identified by similarity to OMNI:NTL02MA2934. (258 aa)    
Predicted Functional Partners:
DET0961
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01MM1085; match to protein family HMM PF01995.
  
     0.736
cetZ
GTPase domain, tubulin/FtsZ family protein; Involved in cell shape control; Belongs to the CetZ family.
  
     0.683
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; Identified by similarity to SP:O67539.
  
     0.682
cetZ-2
GTPase domain, tubulin/FtsZ family protein; Involved in cell shape control; Belongs to the CetZ family.
  
     0.631
DET1500
Conserved hypothetical protein; Identified by similarity to OMNI:NTL02MA1100.
       0.536
DET1501
Flavodoxin; Identified by similarity to SP:P18086.
       0.484
gyrB
DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
  
     0.459
DET0529
Glucose-1-phosphate thymidylyltransferase; Identified by similarity to GP:1814004.
  
     0.459
DET0916
Conserved hypothetical protein; Identified by similarity to OMNI:NTL02MA0630.
  
     0.432
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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