STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET1573Hydrogenase subunit, putative; Identified by similarity to OMNI:NTL01MM1061. (226 aa)    
Predicted Functional Partners:
DET1571
Hydrogenase, group 4, HycE subunit, putative; Identified by similarity to SP:P77329; match to protein family HMM PF00346.
 
  
 0.999
DET1574
Hydrogenase, HycD subunit, putative; Identified by similarity to SP:P77858.
 
  
 0.968
DET1570
Hydrogenase, group 4, HycG subunit, putative; Identified by similarity to SP:P77668.
 
  
 0.934
DET1575
Hydrogenase, HycC subunit, putative; Identified by similarity to SP:P23482.
 
  
 0.929
DET1572
Hydrogenase, membrane subunit, putative; Identified by similarity to SP:P77437.
 
  
 0.923
DET0867
Hydrogenase, group 4, EchE subunit, putative; Identified by similarity to GP:3005971.
  
  
 0.607
DET0862
Hydrogenase, group 4, EchC subunit, putative; Identified by similarity to GP:3005969.
  
  
 0.545
DET0861
Hydrogenase, EchB subunit, putative; Identified by similarity to GP:3005968.
  
  
 0.425
DET0729
[Fe] hydrogenase, HymB subunit, putative; Identified by similarity to GP:14250934.
      
 0.406
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.