STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET1591Methyltransferase, UbiE/COQ5 family; Identified by similarity to SP:O86169. (221 aa)    
Predicted Functional Partners:
DET0399
Ubiquinone/menaquinone biosynthesis methlytransferase UbiE, putative; Identified by similarity to SP:P27851.
  
     0.773
DET1592
AIR synthase domain protein.
       0.773
DET1593
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
cutA
Divalent cation tolerance protein CutA; Identified by similarity to SP:P36654; match to protein family HMM PF03091.
       0.502
nadA
Quinolinate synthetase complex, subunit A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
       0.502
cysE
Serine O-acetyltransferase; Identified by match to protein family HMM TIGR01172.
       0.454
DET0611
Conserved hypothetical protein; Identified by similarity to GP:5199108.
  
     0.407
Your Current Organism:
Dehalococcoides mccartyi
NCBI taxonomy Id: 243164
Other names: D. mccartyi 195, Dehalococcoides ethenogenes 195, Dehalococcoides mccartyi 195, Dehalococcoides mccartyi str. 195, Dehalococcoides mccartyi strain 195
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