STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_0133Lipase/esterase, putative; Similar to GB:AL123456 percent identity: 52.61; identified by sequence similarity; putative. (296 aa)    
Predicted Functional Partners:
DR_0132
Conserved hypothetical protein; Similar to GB:AL123456 percent identity: 56.31; identified by sequence similarity; putative.
       0.546
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.488
nuoI
NADH dehydrogenase I, I subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
   0.475
DR_1499
NADH dehydrogenase I, G subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
   
 
 0.473
DR_1500
NADH dehydrogenase I, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
   0.456
DR_1501
NADH dehydrogenase I, E subunit; Similar to SP:Q56221 PID:1279865 percent identity: 74.23; identified by sequence similarity; putative.
    
   0.453
DR_0134
Hypothetical protein; Identified by Glimmer2; putative.
       0.440
DR_0415
Carboxylesterase, putative; Similar to GP:2641986 percent identity: 52.63; identified by sequence similarity; putative.
 
   
 0.413
DR_2075
Ferredoxin; Similar to GB:M88654 SP:P25528 PID:145915 GB:U00096 PID:1788874 percent identity: 56.52; identified by sequence similarity; putative.
    
   0.412
DR_0011
Conserved hypothetical protein; Similar to GB:U14003 SP:P39315 PID:537052 GB:U00096 PID:1790656 percent identity: 71.94; identified by sequence similarity; putative.
  
   0.403
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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