Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DR_0337Hypothetical protein; Identified by Glimmer2; putative; Belongs to the glycosyl hydrolase 26 family. (598 aa)    
Predicted Functional Partners:
DR_2489
Hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.587
DR_0338
Hypothetical protein; Identified by Glimmer2; putative.
       0.576
DR_0336
fatty-acid--CoA ligase, putative; Similar to PID:1903034 percent identity: 61.09; identified by sequence similarity; putative.
       0.489
DR_0161
Conserved hypothetical protein; Similar to PID:1652052 percent identity: 50.67; identified by sequence similarity; putative.
 
     0.450
DR_0339
N-acyl-L-amino acid amidohydrolase, putative; Similar to PID:1653860 percent identity: 70.99; identified by sequence similarity; putative.
       0.437
DR_0160
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.431
DR_1392
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.406
DR_2329
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.402
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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