STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_0717Leucyl aminopeptidase, putative; Similar to SP: PID:16394 percent identity: 61.64; identified by sequence similarity; putative; Belongs to the peptidase M17 family. (482 aa)    
Predicted Functional Partners:
DR_1524
Cephalosporin acylase; Similar to GB:AL123456 percent identity: 64.57; identified by sequence similarity; putative.
   
 
 0.914
DR_0789
O-acetylserine (thiol)-lyase; Similar to SP:Q43317 percent identity: 69.87; identified by sequence similarity; putative; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 0.839
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.830
DR_0623
Aspartate aminotransferase; Similar to PID:1255699 percent identity: 75.92; identified by sequence similarity; putative.
   
  0.823
DR_1452
Aminotransferase, class I; Similar to SP:Q08432 GB:S61781 PID:975351 PID:1934779 PID:1934787 percent identity: 54.03; identified by sequence similarity; putative.
  
 
  0.809
DR_1333
Glycosyl hyrolase, family 3; Similar to PID:1750216 percent identity: 57.87; identified by sequence similarity; putative.
    
 0.646
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
       0.569
DR_0298
Deoxyguanosine kinase/deoxyadenosine kinase subunit; Similar to GB:U01881 PID:403984 percent identity: 60.41; identified by sequence similarity; putative.
   
 0.534
DR_0299
Deoxyguanosine kinase/deoxyadenosine kinase subunit; Similar to GB:U01881 PID:403984 percent identity: 62.11; identified by sequence similarity; putative.
   
 0.534
MetH
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.478
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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