Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DR_0735Transcriptional regulator, TetR family; Similar to GB:AE000666 percent identity: 48.11; identified by sequence similarity; putative. (229 aa)    
Predicted Functional Partners:
DR_0736
Hypothetical protein; Identified by Glimmer2; putative.
     
 0.661
DR_0734
Hypothetical protein; Identified by Glimmer2; putative.
       0.572
DR_0739
Conserved hypothetical protein; Similar to PID:1651721 percent identity: 51.63; identified by sequence similarity; putative; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     
 0.470
DR_A0248
Transcriptional regulator, MarR family; Similar to GP:2654484 percent identity: 55.08; identified by sequence similarity; putative.
  
   
 0.452
DR_0740
Drug transport protein, putative; Similar to GB:U00096 PID:1736781 PID:1736784 PID:1788390 GB:U00096 percent identity: 50.89; identified by sequence similarity; putative; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
     
 0.450
DR_A0128
Hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.441
DR_A0145
Peroxidase, putative; Similar to GP:2160705 percent identity: 47.72; identified by sequence similarity; putative.
  
     0.438
DR_0259
Conserved hypothetical protein; Similar to SP:Q10846 PID:1403442 GB:AL123456 percent identity: 49.63; identified by sequence similarity; putative.
  
   
 0.422
DR_A0131
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 53.48; identified by sequence similarity; putative.
  
    0.410
DR_0738
Hypothetical protein; Identified by Glimmer2; putative.
     
 0.404
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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