STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_0797Hypothetical protein; Identified by Glimmer2; putative. (158 aa)    
Predicted Functional Partners:
DR_0798
Acetyltransferase, putative; Similar to SP:P14507 PID:153586 percent identity: 54.93; identified by sequence similarity; putative.
 
   0.758
DR_0796
Acetyltransferase, putative; Similar to SP:P14507 PID:153586 percent identity: 50.39; identified by sequence similarity; putative.
 
   0.674
lysJ
Acetylornithine aminotransferase; Catalyzes the transfer of the amino group of L-glutamate to [LysW]-aminoadipate 6-semialdehyde, generating [LysW]-gamma-L-lysine. Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. LysJ subfamily.
     
 0.623
DR_0795
Hypothetical protein; Identified by Glimmer2; putative.
       0.605
DR_0793
Conserved hypothetical protein; Similar to SP:P45862 PID:853755 GB:AL009126 percent identity: 52.66; identified by sequence similarity; putative.
 
  
 0.534
DR_0792
Conserved hypothetical protein; Similar to GB:U00096 SP:P76352 PID:2367126 percent identity: 51.47; identified by sequence similarity; putative.
 
     0.497
DR_0799
Glucose-fructose oxidoreductase; Similar to PID:1657417 percent identity: 61.56; identified by sequence similarity; putative.
       0.481
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.