STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_0937Tetratricopeptide repeat family protein; Similar to PID:1652192 percent identity: 41.71; identified by sequence similarity; putative. (596 aa)    
Predicted Functional Partners:
DR_0938
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.878
rex
Conserved hypothetical protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
       0.843
DR_0940
Hypothetical protein; Identified by Glimmer2; putative.
       0.784
DR_1891
Tetratricopeptide repeat family protein; Similar to PID:1890281 percent identity: 45.62; identified by sequence similarity; putative.
  
    0.771
DR_0121
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.733
rlmN
Conserved hypothetical protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
       0.669
DR_0975
MutT/nudix family protein; Similar to GB:L42023 SP:P44932 PID:1006021 PID:1221014 PID:1205157 percent identity: 79.31; identified by sequence similarity; putative; Belongs to the Nudix hydrolase family.
 
     0.601
DR_1514
2-phosphoglycerate kinase, putative; Similar to GB:X70785 PID:467751 percent identity: 63.32; identified by sequence similarity; putative.
  
     0.591
DR_1115
S-layer-like array-related protein; Similar to PID:993026 percent identity: 63.68; identified by sequence similarity; putative.
  
     0.590
DR_1185
S-layer-like array-related protein; Similar to PID:993026 percent identity: 58.12; identified by sequence similarity; putative.
  
     0.584
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.