Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DR_0971Electron transfer flavoprotein, beta subunit; Similar to SP:P53575 PID:1209054 percent identity: 60.00; identified by sequence similarity; putative. (253 aa)    
Predicted Functional Partners:
DR_0970
Electron transfer flavoprotein, alpha subunit; Similar to SP:P94551 PID:1770042 GB:AL009126 percent identity: 56.33; identified by sequence similarity; putative.
 0.999
DR_0801
Lycopene cyclase; Similar to PID:587557 percent identity: 51.69; identified by sequence similarity; putative; Belongs to the lycopene cyclase family.
  
 
 0.835
DR_1318
acyl-CoA dehydrogenase; Similar to SP:P41367 PID:1127798 percent identity: 70.63; identified by sequence similarity; putative.
 
 
 0.828
DR_1544
acyl-CoA dehydrogenase; Similar to PID:1055219 SP:P52042 percent identity: 67.20; identified by sequence similarity; putative.
 
 
 0.817
DR_1487
enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase; Similar to SP:P55100 PID:1181206 percent identity: 63.02; identified by sequence similarity; putative.
  
 
 0.816
DR_1255
acyl-CoA dehydrogenase; Similar to SP:P45867 PID:853760 GB:AL009126 percent identity: 69.19; identified by sequence similarity; putative.
 
 
 0.814
DR_0922
acyl-CoA dehydrogenase; Similar to SP:P45857 PID:881606 PID:1303933 GB:AL009126 percent identity: 61.84; identified by sequence similarity; putative.
 
 
 0.794
DR_A0337
glutaryl-CoA dehydrogenase; Similar to GB:AE000782 percent identity: 68.44; identified by sequence similarity; putative.
 
 
 0.749
DR_2361
acyl-CoA dehydrogenase, putative; Similar to GP:2909448 percent identity: 54.11; identified by sequence similarity; putative.
 
 
 0.725
DR_A0250
acyl-CoA dehydrogenase, putative; Similar to GP:2909448 percent identity: 53.81; identified by sequence similarity; putative.
 
 
 0.706
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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