STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_0983tRNA nucleotidyltransferase, putative; tRNA nucleotidyltransferase involved in the synthesis of the tRNA CCA terminus. Adds the two cytidine residues to tRNA. (374 aa)    
Predicted Functional Partners:
DR_0982
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 68.18; identified by sequence similarity; putative.
       0.772
DR_2341
birA bifunctional protein; Similar to SP:P42975 PID:1146239 PID:755608 PID:773349 GB:AL009126 percent identity: 100.00; identified by sequence similarity; putative.
  
  
 0.690
DR_1756
Periplasmic serine protease Do, putative; Similar to PID:1652463 percent identity: 57.89; identified by sequence similarity; putative.
 
    0.637
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
  
 
 0.505
pnp
Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
 
 
 0.487
DR_0603
Cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains protein; Similar to GB:D26185 SP:P21335 GB:X52144 PID:40011 PID:467408 percent identity: 49.28; identified by sequence similarity; putative.
  
 
 0.479
DR_0981
GGDEF family protein; Similar to GB:AE000657 percent identity: 53.42; identified by sequence similarity; putative.
       0.468
DR_0153
Riboflavin-specific deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.453
tilS
Cell cycle protein MesJ, putative/cytosine deaminase-related protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
  
  
 0.436
DR_0335
ATP-dependent RNA helicase, putative; Similar to SP:P23304 GB:M63288 GB:U03750 PID:432406 PID:606102 percent identity: 54.68; identified by sequence similarity; putative; Belongs to the DEAD box helicase family.
 
 
 0.435
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.