STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_1007MutT/nudix family protein; Similar to SP:P54570 PID:1303984 GB:AL009126 percent identity: 62.11; identified by sequence similarity; putative; Belongs to the Nudix hydrolase family. (166 aa)    
Predicted Functional Partners:
DR_2204
MutT/nudix family protein; Similar to SP:P54570 PID:1303984 GB:AL009126 percent identity: 55.42; identified by sequence similarity; putative.
  
  
  0.976
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
 0.905
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
    
  0.903
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
   
 
  0.901
DR_1008
Riboflavin kinase/FMN adenylyltransferase; Similar to GB:D10483 SP:P08391 GB:M10428 PID:147762 PID:216452 percent identity: 59.04; identified by sequence similarity; putative; Belongs to the ribF family.
  
   0.848
DR_1006
dGTP triphosphohydrolase-related protein; Similar to GP:2739099 percent identity: 60.68; identified by sequence similarity; putative; Belongs to the dGTPase family. Type 2 subfamily.
       0.672
nnrD
Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family.
  
 0.636
DR_2341
birA bifunctional protein; Similar to SP:P42975 PID:1146239 PID:755608 PID:773349 GB:AL009126 percent identity: 100.00; identified by sequence similarity; putative.
  
    0.565
DR_0335
ATP-dependent RNA helicase, putative; Similar to SP:P23304 GB:M63288 GB:U03750 PID:432406 PID:606102 percent identity: 54.68; identified by sequence similarity; putative; Belongs to the DEAD box helicase family.
  
 0.489
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.