STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
DR_1024Conserved hypothetical protein; Possible metal-dependent hydrolase; Belongs to the metal hydrolase YfiT family. (171 aa)    
Predicted Functional Partners:
DR_1022
Conserved hypothetical protein; Similar to SP:P42979 PID:755602 PID:1146233 GB:AL009126 percent identity: 63.21; identified by sequence similarity; putative.
 
     0.828
DR_1025
MutT/nudix family protein; Similar to GB:AL009126 percent identity: 51.35; identified by sequence similarity; putative; Belongs to the Nudix hydrolase family.
       0.805
DR_1023
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
DR_0053
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 48.99; identified by sequence similarity; putative.
 
     0.721
DR_1899
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.681
DR_2623
Conserved hypothetical protein; Similar to PID:1146207 SP:P50736 GB:AL009126 percent identity: 59.37; identified by sequence similarity; putative.
  
    0.644
DR_1021
Hypothetical protein; Identified by Glimmer2; putative.
       0.592
DR_1014
Vanadium chloroperoxidase-related protein; Similar to GP:1888406 percent identity: 57.35; identified by sequence similarity; putative.
 
     0.548
DR_2391
Conserved hypothetical protein; Similar to SP:P71551 PID:1524203 GB:AL123456 percent identity: 48.79; identified by sequence similarity; putative.
  
     0.486
DR_0799
Glucose-fructose oxidoreductase; Similar to PID:1657417 percent identity: 61.56; identified by sequence similarity; putative.
 
    0.477
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.