STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_1059Hypothetical protein; Identified by Glimmer2; putative. (200 aa)    
Predicted Functional Partners:
DR_1057
Phosphinothricin acetyltransferase, putative; Similar to SP:P16426 GB:X05822 GB:X17220 PID:47129 PID:581681 percent identity: 43.02; identified by sequence similarity; putative.
   
   0.590
cinA
cinA protein; Similar to PID:2251087 percent identity: 100.00; identified by sequence similarity; putative; Belongs to the CinA family.
  
    0.588
DR_0183
Glutamate synthase, large subunit; Similar to PID:1339950 percent identity: 71.96; identified by sequence similarity; putative.
     
 0.580
DR_1056
Hypothetical protein; Identified by Glimmer2; putative.
       0.544
DR_1058
Hypothetical protein; Identified by Glimmer2; putative.
       0.543
DR_0215
Aminotransferase, class V; Similar to GP:3402253 percent identity: 55.47; identified by sequence similarity; putative.
  
    0.511
DR_1061
NADPH quinone oxidoreductase, putative; Similar to GB:AL123456 percent identity: 54.81; identified by sequence similarity; putative.
       0.501
DR_1060
Conserved hypothetical protein; Similar to GB:AL123456 percent identity: 71.00; identified by sequence similarity; putative.
       0.496
DR_0350
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 41.33; identified by sequence similarity; putative.
       0.422
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.