STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_1063Peptidyl-prolyl cis-trans isomerase C; Similar to SP:P39159 PID:836657 PID:693800 GB:U00096 PID:1790211 percent identity: 50.65; identified by sequence similarity; putative. (344 aa)    
Predicted Functional Partners:
DR_0651
Arginase; Similar to SP:P53608 PID:1276985 percent identity: 68.79; identified by sequence similarity; putative; Belongs to the arginase family.
  
   
 0.795
DR_1062
FemA-related protein; Similar to SP:P14304 PID:153015 PID:46581 percent identity: 54.61; identified by sequence similarity; putative.
     
 0.618
DR_0071
Peptidyl-prolyl cis-trans isomerse, putative, PpiC family; Similar to GB:U00096 SP:P77241 PID:1580712 PID:1773125 PID:1786645 percent identity: 48.44; identified by sequence similarity; putative.
  
     0.560
secD
Protein-export membrane protein, putative; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
  
 0.503
groS
Chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
   
 
 0.484
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring.
 
 
 
 0.477
DR_2177
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
      
 0.475
leuC2
3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
     
 0.461
DR_1769
Serine/threonine protein kinase-related protein; Plays an important role in resistance to desiccation and radiation, maybe by protecting genome integrity under extreme conditions.
  
 
 0.442
rqkA
Serine/threonine protein kinase, putative; Plays an important role in radiation resistance and DNA double-strand break (DSB) repair. Involved in transcriptional regulation of genes important for bacterial stress response. Phosphorylates PprA in vitro.
   
 
 0.434
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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