STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_1069Hypothetical protein; Identified by Glimmer2; putative. (143 aa)    
Predicted Functional Partners:
hbd
3-hydroxybutyryl-CoA dehydrogenase; Similar to SP:P45856 PID:881605 PID:1303932 GB:AL009126 percent identity: 69.78; identified by sequence similarity; putative; Belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
       0.693
DR_1070
Peptidase E, putative; Similar to SP:P36936 GB:U01246 PID:414427 percent identity: 50.00; identified by sequence similarity; putative; Belongs to the peptidase S51 family.
       0.533
DR_1071
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 50.00; identified by sequence similarity; putative.
       0.533
DR_1072
acetyl-CoA acetyltransferase; Similar to GB:L42023 SP:P44873 PID:1005748 PID:1220864 PID:1205019 percent identity: 73.03; identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Thiolase family.
       0.505
DR_1067
Hypothetical protein; Identified by Glimmer2; putative.
       0.417
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.