STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_1392Hypothetical protein; Identified by Glimmer2; putative. (276 aa)    
Predicted Functional Partners:
DR_0790
Conserved hypothetical protein; Similar to PID:1653082 percent identity: 48.74; identified by sequence similarity; putative; Belongs to the PlsY family.
   
 0.966
DR_2329
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.775
DR_2516
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.732
DR_0262
ABC transporter, periplasmic substrate-binding protein, solute-binding family 1; Similar to GP:3319740 percent identity: 61.30; identified by sequence similarity; putative.
      
 0.712
DR_0263
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.712
DR_0264
Glycogen operon protein GlgX; Similar to SP:Q10767 PID:1403478 GB:AL123456 percent identity: 73.33; identified by sequence similarity; putative; Belongs to the glycosyl hydrolase 13 family.
      
 0.712
DR_1080
rfbJ protein/conserved hypothetical protein; Similar to SP:P37786 PID:454907 percent identity: 59.86; identified by sequence similarity; putative.
  
     0.697
DR_0008
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.611
DR_0389
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 58.88; identified by sequence similarity; putative.
 
     0.543
DR_1478
Conserved hypothetical protein; Similar to GB:U00017 PID:467027 percent identity: 53.57; identified by sequence similarity; putative.
  
     0.483
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.