STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_1629c-di-GMP phosphodiesterase A; Similar to GP:3659618 percent identity: 57.72; identified by sequence similarity; putative. (790 aa)    
Predicted Functional Partners:
DR_0693
Ammonium transporter; Similar to GP:3136068 percent identity: 65.25; identified by sequence similarity; putative.
 
      0.871
DR_0719
Conserved hypothetical protein; Similar to PID:558266 percent identity: 66.88; identified by sequence similarity; putative.
  
 0.754
DR_0039
Conserved hypothetical protein; Similar to GB:AE000657 percent identity: 63.75; identified by sequence similarity; putative.
  
 0.745
DR_0750
Sensory box/GGDEF family protein; Similar to PID:1001414 PID:1001455 percent identity: 53.48; identified by sequence similarity; putative.
 
 
0.719
DR_2299
GGDEF family protein; Similar to SP:P55552 PID:2182511 percent identity: 54.56; identified by sequence similarity; putative.
 
 
0.709
DR_A0352
Methyl-accepting chemotaxis protein; Similar to PID:1001350 PID:1001300 percent identity: 52.62; identified by sequence similarity; putative.
 
 
 
 0.675
DR_A0354
Methyl-accepting chemotaxis protein; Similar to PID:1652103 percent identity: 52.14; identified by sequence similarity; putative.
 
 
 
 0.673
DR_A0353
Methyl-accepting chemotaxis-related protein; Similar to PID:1652103 percent identity: 51.90; identified by sequence similarity; putative.
 
 
 0.660
DR_1565
Conserved hypothetical protein; Similar to PID:558266 percent identity: 57.23; identified by sequence similarity; putative.
 
  
 0.652
DR_0267
Conserved hypothetical protein; Similar to SP:Q11024 PID:1419057 GB:AL123456 percent identity: 59.20; identified by sequence similarity; putative.
 
0.601
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.