STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CpdB2`,3`-cyclic-nucleotide 2`-phosphodiesterase; Similar to SP:P08331 GB:M13464 PID:145584 GB:U00096 PID:1790658 percent identity: 67.05; identified by sequence similarity; putative; Belongs to the 5'-nucleotidase family. (678 aa)    
Predicted Functional Partners:
DR_0505
5`-nucleotidase family protein; Similar to PID:1239994 SP:P54602 GB:AL009126 percent identity: 53.23; identified by sequence similarity; putative; Belongs to the 5'-nucleotidase family.
  
  
 
0.923
surE
Survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
 0.910
udk
Uridine kinase; Similar to GB:AL009126 percent identity: 70.73; identified by sequence similarity; putative.
  
 
 0.908
DR_0403
Inosine-uridine preferring nucleoside hydrolase; Similar to SP:Q27546 PID:1151248 percent identity: 59.28; identified by sequence similarity; putative.
 
 
  0.908
DR_2177
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
    
 0.907
DR_0443
Pyrimidine-nucleoside phosphorylase; Similar to SP:P77836 PID:1620901 PID:1638805 percent identity: 69.97; identified by sequence similarity; putative.
    
 0.906
DeoD
Purine nucleoside phosphorylase; Similar to GB:AL009126 percent identity: 78.88; identified by sequence similarity; putative.
    
  0.902
DR_1731
Glycolate oxidase subunit GlcD; Similar to GB:AE000657 percent identity: 61.64; identified by sequence similarity; putative.
  
    0.509
DR_1732
Glycolate oxidase subunit GlcE; Similar to PID:1651931 percent identity: 60.44; identified by sequence similarity; putative.
  
    0.509
DR_1735
Hypothetical protein; Identified by Glimmer2; putative.
       0.502
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
Server load: low (22%) [HD]