STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_1875Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 59.56; identified by sequence similarity; putative. (222 aa)    
Predicted Functional Partners:
DR_1001
Phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase; Similar to GB:X65945 SP:P39912 PID:39813 PID:2293220 GB:AL009126 percent identity: 73.86; identified by sequence similarity; putative.
       0.572
DR_1876
Conserved hypothetical protein; Similar to PID:2394395 percent identity: 49.44; identified by sequence similarity; putative.
       0.551
DR_2084
Glycerophosphoryl diester phosphodiesterase; Similar to PID:2193938 GB:AL123456 percent identity: 50.82; identified by sequence similarity; putative.
      0.535
DR_1877
Conserved hypothetical protein; Similar to GB:AE000511 PID:2314231 percent identity: 64.63; identified by sequence similarity; putative.
       0.445
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.