STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_1895Alanine dehydrogenase; Similar to GB:L20916 SP:Q08352 PID:299163 PID:1665852 GB:AL009126 percent identity: 72.43; identified by sequence similarity; putative; Belongs to the AlaDH/PNT family. (390 aa)    
Predicted Functional Partners:
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
 0.969
DR_1350
Aminotransferase, class V; Similar to GB:AE000782 percent identity: 56.06; identified by sequence similarity; putative.
     
 0.906
DR_1896
Hypothetical protein; Identified by Glimmer2; putative.
       0.662
DR_1894
Transcriptional regulator, AsnC family; Similar to SP:P42179 PID:790513 percent identity: 67.33; identified by sequence similarity; putative.
     
 0.627
DR_1893
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; Similar to SP:P71578 PID:1552563 GB:AL123456 percent identity: 67.14; identified by sequence similarity; putative.
       0.577
gcvP
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.473
DR_0183
Glutamate synthase, large subunit; Similar to PID:1339950 percent identity: 71.96; identified by sequence similarity; putative.
      
 0.432
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.