STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lutCConserved hypothetical protein; May function in L-lactate utilization; Belongs to the LutC/YkgG family. (212 aa)    
Predicted Functional Partners:
DR_1907
Fumarate reductase-related protein; Similar to GB:AE000666 percent identity: 62.71; identified by sequence similarity; putative.
 
 0.936
DR_1730
Glycolate oxidase, iron-sulfur subunit; Similar to PID:1652221 percent identity: 58.18; identified by sequence similarity; putative.
 
 0.810
pta
Phosphate acetyltransferase; Involved in acetate metabolism; In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.767
rpiA
Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
   
  
 0.747
DR_2565
Iron-sulfur binding reductase, putative; Similar to GB:AE000782 percent identity: 54.75; identified by sequence similarity; putative.
  
 
 0.641
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
  
 0.576
DR_1906
L-lactate permease, putative; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.561
DR_1900
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.509
DR_1901
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.509
DR_2544
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.509
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.