STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_1955Extracellular solute-binding protein, family 5; Similar to PID:1813495 percent identity: 54.38; identified by sequence similarity; putative. (520 aa)    
Predicted Functional Partners:
DR_0959
Peptide ABC transporter, permease protein; Similar to PID:1813496 percent identity: 71.08; identified by sequence similarity; putative.
 
 0.913
DR_0364
Peptide ABC transporter, permease protein, putative; Similar to GB:U00096 PID:1742426 PID:1742437 PID:1787761 percent identity: 62.23; identified by sequence similarity; putative.
 
 0.845
DR_0958
Peptide ABC transporter, permease protein; Similar to PID:1813497 percent identity: 69.76; identified by sequence similarity; putative.
 
 0.844
DR_1570
Peptide ABC transporter, permease protein; Similar to GB:AE000657 percent identity: 63.94; identified by sequence similarity; putative.
 
 0.722
DR_0365
Peptide ABC transporter, permease protein; Similar to PID:1813497 percent identity: 59.73; identified by sequence similarity; putative.
 
 0.710
DR_A0209
Peptide ABC transporter, permease protein; Similar to PID:1001492 PID:1001545 percent identity: 62.93; identified by sequence similarity; putative.
 
 0.697
DR_1568
Peptide ABC transporter, ATP-binding protein; Similar to SP:P42064 PID:677943 GB:AL009126 percent identity: 70.56; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
  
 0.614
DR_1567
Peptide ABC transporter, ATP-binding protein; Similar to SP:P42065 PID:677944 GB:AL009126 percent identity: 75.23; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
 
 0.586
DR_A0003
Succinate-semialdehyde dehydrogenase; Similar to GB:M88334 SP:P25526 PID:147901 GB:U00096 PID:1789015 percent identity: 69.60; identified by sequence similarity; putative.
      
 0.572
DR_0363
Peptide ABC transporter, periplasmic peptide-binding protein, putative; Similar to GB:U00096 PID:1742427 PID:1742438 PID:1787762 percent identity: 49.22; identified by sequence similarity; putative.
  
  
 
0.551
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.