STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_1960acetyl-CoA acetyltransferase; Similar to GB:U08465 SP:P45359 PID:475715 percent identity: 73.47; identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Thiolase family. (399 aa)    
Predicted Functional Partners:
DR_1487
enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase; Similar to SP:P55100 PID:1181206 percent identity: 63.02; identified by sequence similarity; putative.
 
 0.999
DR_1318
acyl-CoA dehydrogenase; Similar to SP:P41367 PID:1127798 percent identity: 70.63; identified by sequence similarity; putative.
  
 0.981
DR_A0196
acyl-CoA dehydrogenase, putative; Similar to GB:AL123456 percent identity: 73.00; identified by sequence similarity; putative.
  
 0.981
hbd
3-hydroxybutyryl-CoA dehydrogenase; Similar to SP:P45856 PID:881605 PID:1303932 GB:AL009126 percent identity: 69.78; identified by sequence similarity; putative; Belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
 
 0.976
DR_A0143
3-hydroxyacyl-CoA dehydrogenase, putative; Similar to SP:P41938 PID:559411 percent identity: 56.34; identified by sequence similarity; putative.
 
 0.965
DR_A0054
succinyl-CoA:3-ketoacid-CoA transferase, putative; Similar to SP:Q29551 PID:164423 percent identity: 65.91; identified by sequence similarity; putative; Belongs to the 3-oxoacid CoA-transferase family.
 
 
 0.960
DR_0460
acetyl-CoA synthase; Similar to PID:1001216 PID:1001254 percent identity: 62.90; identified by sequence similarity; putative.
  
 
 0.950
pta
Phosphate acetyltransferase; Involved in acetate metabolism; In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.940
acsA
acetyl-CoA synthase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.938
gltA
Citrate synthase; Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect (By similarity).
  
 0.933
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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