STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_1968Nitroreductase; Similar to GB:X60110 GB:S55441 PID:48247 PID:265804 percent identity: 57.00; identified by sequence similarity; putative. (215 aa)    
Predicted Functional Partners:
DR_1969
Conserved hypothetical protein; Similar to PID:1652073 percent identity: 53.40; identified by sequence similarity; putative.
     
 0.597
DR_2341
birA bifunctional protein; Similar to SP:P42975 PID:1146239 PID:755608 PID:773349 GB:AL009126 percent identity: 100.00; identified by sequence similarity; putative.
  
    0.595
DR_A0008
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 52.46; identified by sequence similarity; putative.
  
  
 0.555
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
  
  
 0.493
ribBA
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.489
DR_0857
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.445
DR_0183
Glutamate synthase, large subunit; Similar to PID:1339950 percent identity: 71.96; identified by sequence similarity; putative.
     
 0.429
MetH
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.426
DR_0603
Cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains protein; Similar to GB:D26185 SP:P21335 GB:X52144 PID:40011 PID:467408 percent identity: 49.28; identified by sequence similarity; putative.
  
  
 0.417
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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