STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_1968Nitroreductase; Similar to GB:X60110 GB:S55441 PID:48247 PID:265804 percent identity: 57.00; identified by sequence similarity; putative. (215 aa)    
Predicted Functional Partners:
DR_1754
Conserved hypothetical protein; Similar to GB:D26185 SP:P37560 PID:385178 PID:467452 GB:AL009126 percent identity: 72.48; identified by sequence similarity; putative.
      
 0.839
DR_A0008
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 52.46; identified by sequence similarity; putative.
  
  
 0.595
DR_1969
Conserved hypothetical protein; Similar to PID:1652073 percent identity: 53.40; identified by sequence similarity; putative.
  
    0.583
DR_2341
birA bifunctional protein; Similar to SP:P42975 PID:1146239 PID:755608 PID:773349 GB:AL009126 percent identity: 100.00; identified by sequence similarity; putative.
  
    0.572
DR_0603
Cytidine/deoxycytidylate deaminase/nudix/methyltransferase domains protein; Similar to GB:D26185 SP:P21335 GB:X52144 PID:40011 PID:467408 percent identity: 49.28; identified by sequence similarity; putative.
  
  
 0.460
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
  
  
 0.424
tilS
Cell cycle protein MesJ, putative/cytosine deaminase-related protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
  
  
 0.417
ribBA
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.414
MetH
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.413
DR_A0224
Homoprotocatechuate 2,3-dioxygenase, putative; Similar to GP:1377927 percent identity: 58.17; identified by sequence similarity; putative.
  
  
 0.413
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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