Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DR_1985Beta-lactamase, putative; Similar to GP:2648043 percent identity: 57.58; identified by sequence similarity; putative. (424 aa)    
Predicted Functional Partners:
DR_1986
degV protein; May bind long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism.
       0.835
tdk
Thymidine kinase; Similar to SP:Q03221 GB:M97678 PID:405819 PID:853771 GB:AL009126 percent identity: 71.12; identified by sequence similarity; putative.
     
 0.624
DR_0433
Beta-lactamase, putative; Similar to GP:1928922 percent identity: 45.18; identified by sequence similarity; putative.
  
     0.526
DR_1987
Hypothetical protein; Identified by Glimmer2; putative.
       0.512
DR_1099
Conserved hypothetical protein; Similar to PID:1001780 PID:1001829 percent identity: 54.29; identified by sequence similarity; putative.
  
     0.461
DR_1003
Transcriptional regulator; Similar to GB:AL009126 percent identity: 55.33; identified by sequence similarity; putative.
  
     0.455
DR_2108
Molybdate metabolism regulator-related protein; Similar to GB:U00096 PID:1788433 percent identity: 44.90; identified by sequence similarity; putative.
 
     0.425
DR_0091
Conserved hypothetical protein; Similar to PID:1653202 percent identity: 46.27; identified by sequence similarity; putative.
  
     0.423
DR_1314
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 62.71; identified by sequence similarity; putative.
  
     0.418
uvsE
UV damage endonuclease, putative; Component in a DNA repair pathway. Removal of UV LIGHT damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion. Belongs to the uve1/UvsE family.
 
     0.417
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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