STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_1987Hypothetical protein; Identified by Glimmer2; putative. (173 aa)    
Predicted Functional Partners:
DR_1985
Beta-lactamase, putative; Similar to GP:2648043 percent identity: 57.58; identified by sequence similarity; putative.
       0.512
DR_1986
degV protein; May bind long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism.
       0.512
tdk
Thymidine kinase; Similar to SP:Q03221 GB:M97678 PID:405819 PID:853771 GB:AL009126 percent identity: 71.12; identified by sequence similarity; putative.
       0.416
DR_1988
PhoH-related protein; Similar to PID:2078031 GB:AL123456 percent identity: 68.79; identified by sequence similarity; putative.
       0.406
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.