STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
katACatalase; Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide. Belongs to the catalase family. (536 aa)    
Predicted Functional Partners:
DR_A0259
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
0.919
kynU
Kynureninase, putative; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
   
 
  0.904
sodC
Superoxide dismutase (sodC), Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
  
 0.828
DR_A0202
Superoxide dismutase (sodC), Cu-Zn family; Similar to SP:P15453 percent identity: 54.55; identified by sequence similarity; putative.
  
 
 0.790
sodA
Superoxide dismutase (sodA), Mn family; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 0.766
DR_2381
Aldehyde dehydrogenase; Similar to GB:U00096 SP:P77455 PID:1742267 PID:1787653 percent identity: 72.19; identified by sequence similarity; putative.
   
 0.720
DR_A0146
Conserved hypothetical protein; Similar to SP:P55495 PID:2182449 percent identity: 49.02; identified by sequence similarity; putative.
      
 0.647
DR_1999
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 57.14; identified by sequence similarity; putative.
       0.645
DR_2242
Thiol-specific antioxidant protein, putative; Similar to PID:1001492 PID:1001510 percent identity: 64.39; identified by sequence similarity; putative.
  
 
 0.596
DR_1997
Conserved hypothetical protein; Similar to PID:1653846 percent identity: 100.00; identified by sequence similarity; putative.
       0.557
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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