STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_2012Hypothetical protein; Identified by Glimmer2; putative. (457 aa)    
Predicted Functional Partners:
DR_1740
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.581
DR_0160
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.489
DR_A0035
O-antigen transporter RfbX, putative; Similar to GB:L07293 SP:Q03583 PID:152778 percent identity: 50.54; identified by sequence similarity; putative.
 
   
 0.466
DR_1223
Multidrug resistance protein-related protein; Similar to GB:AE000782 percent identity: 45.70; identified by sequence similarity; putative.
  
     0.457
rpmC
Ribosomal protein L29; Binds the 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit; Belongs to the universal ribosomal protein uL29 family.
  
     0.436
DR_1013
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.436
DR_0787
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 46.64; identified by sequence similarity; putative.
  
     0.435
DR_1196
Transposase, putative; Similar to PID:1162996 percent identity: 48.02; identified by sequence similarity; putative.
  
     0.424
DR_0161
Conserved hypothetical protein; Similar to PID:1652052 percent identity: 50.67; identified by sequence similarity; putative.
 
     0.410
DR_0144
Transposase, putative; Similar to PID:1162996 percent identity: 51.27; identified by sequence similarity; putative.
  
     0.403
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.