STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_2015Oxidoreductase, FAD-binding; Similar to GP:3426015 percent identity: 69.00; identified by sequence similarity; putative. (421 aa)    
Predicted Functional Partners:
DR_2014
Hypothetical protein; Identified by Glimmer2; putative.
       0.801
DR_0862
Phytoene synthase; Similar to SP:P37270 PID:575608 percent identity: 60.07; identified by sequence similarity; putative.
 
  
 0.633
DR_2016
Hypothetical protein; Identified by Glimmer2; putative.
       0.564
DR_0801
Lycopene cyclase; Similar to PID:587557 percent identity: 51.69; identified by sequence similarity; putative; Belongs to the lycopene cyclase family.
 
  
 0.496
DR_2017
ArgE/DapE/Acy1 family protein; Similar to PID:2274891 percent identity: 48.64; identified by sequence similarity; putative.
       0.468
DR_1390
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.416
DR_2018
Hypothetical protein; Identified by Glimmer2; putative.
       0.403
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.