Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DR_2019Conserved hypothetical protein; Similar to PID:1872146 percent identity: 62.16; identified by sequence similarity; putative. (346 aa)    
Predicted Functional Partners:
DR_0754
Conserved hypothetical protein; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily.
 
 
 0.931
DR_2018
Hypothetical protein; Identified by Glimmer2; putative.
       0.620
DR_0948
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.580
DR_0753
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 50.23; identified by sequence similarity; putative.
  
   
0.527
DR_2017
ArgE/DapE/Acy1 family protein; Similar to PID:2274891 percent identity: 48.64; identified by sequence similarity; putative.
       0.525
DR_1300
Cytochrome c-type biogenesis protein, putative; Similar to GB:AL123456 percent identity: 61.57; identified by sequence similarity; putative.
     
 0.524
DR_0560
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 63.37; identified by sequence similarity; putative.
  
   
0.512
DR_2617
Cytochrome AA3-controlling protein CtaA, putative; Similar to PIR:A45335 percent identity: 57.22; identified by sequence similarity; putative.
 
    0.504
DR_0025
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 53.97; identified by sequence similarity; putative.
 
     0.485
DR_0009
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 55.07; identified by sequence similarity; putative.
 
     0.442
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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