Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
vapCPlasmid stability protein, putative; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (130 aa)    
Predicted Functional Partners:
DR_2101
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 51.88; identified by sequence similarity; putative.
       0.773
DR_2103
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
DR_2104
Conserved hypothetical protein; Similar to PID:1651874 percent identity: 53.98; identified by sequence similarity; putative.
       0.773
DR_2105
Hypothetical protein; Identified by Glimmer2; putative.
       0.570
DR_2106
Conserved hypothetical protein; Similar to GB:AL009126 percent identity: 81.14; identified by sequence similarity; putative.
       0.570
DR_0469
Conserved hypothetical protein; Similar to PID:1651963 percent identity: 56.00; identified by sequence similarity; putative.
  
     0.553
DR_1722
Conserved hypothetical protein; Similar to PID:1651963 percent identity: 58.48; identified by sequence similarity; putative.
  
     0.547
DR_2107
ABC transporter, ATP-binding protein, Ycf16 family; Similar to GB:AL009126 percent identity: 79.84; identified by sequence similarity; putative.
       0.407
cinA
cinA protein; Similar to PID:2251087 percent identity: 100.00; identified by sequence similarity; putative; Belongs to the CinA family.
     
 0.405
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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