Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DR_2159Hypothetical protein; Identified by Glimmer2; putative. (255 aa)    
Predicted Functional Partners:
DR_2160
Delta-aminolevulinic acid dehydratase; Similar to GB:X70434 percent identity: 74.77; identified by sequence similarity; putative; Belongs to the ALAD family.
       0.630
DR_2157
Hypothetical protein; Identified by Glimmer2; putative.
       0.628
DR_2158
Hypothetical protein; Identified by Glimmer2; putative.
       0.628
DR_2156
Hypothetical protein; Identified by Glimmer2; putative.
       0.592
ftsE
ftsE protein; Part of the ABC transporter FtsEX involved in cellular division.
     
 0.574
DR_2161
Protein-tyrosine phosphatase-related protein; Similar to GP:2224838 percent identity: 50.26; identified by sequence similarity; putative.
 
     0.543
DR_A0345
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.492
DR_2162
Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 46.15; identified by sequence similarity; putative.
       0.473
DR_2163
Hypothetical protein; Identified by Glimmer2; putative.
       0.467
ispH
lytB protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
       0.467
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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