STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_2162Conserved hypothetical protein; Similar to GB:Pyro_h percent identity: 46.15; identified by sequence similarity; putative. (181 aa)    
Predicted Functional Partners:
DR_2161
Protein-tyrosine phosphatase-related protein; Similar to GP:2224838 percent identity: 50.26; identified by sequence similarity; putative.
       0.788
DR_2163
Hypothetical protein; Identified by Glimmer2; putative.
       0.762
ispH
lytB protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
       0.762
DR_2160
Delta-aminolevulinic acid dehydratase; Similar to GB:X70434 percent identity: 74.77; identified by sequence similarity; putative; Belongs to the ALAD family.
       0.590
DR_1263
Conserved hypothetical protein; Similar to GP:3319721 percent identity: 64.34; identified by sequence similarity; putative.
 
     0.574
kptA
Hypothetical protein; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase (By similarity).
 
     0.535
DR_A0302
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.513
DR_A0145
Peroxidase, putative; Similar to GP:2160705 percent identity: 47.72; identified by sequence similarity; putative.
  
     0.493
DR_A0167
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 58.33; identified by sequence similarity; putative; Belongs to the UPF0215 family.
  
     0.489
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
  
    0.484
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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