STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR_2195Alpha-glucan phosphorylase, putative; Similar to GP:2660639 percent identity: 62.73; identified by sequence similarity; putative. (838 aa)    
Predicted Functional Partners:
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
  
 
 0.981
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
  
 0.980
glgB
1,4-alpha-glucan branching enzyme, putative; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 0.979
DR_1824
Glucose-1-phosphate adenylyltransferase; Similar to PID:1944411 percent identity: 60.06; identified by sequence similarity; putative; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
 
 0.967
DR_0264
Glycogen operon protein GlgX; Similar to SP:Q10767 PID:1403478 GB:AL123456 percent identity: 73.33; identified by sequence similarity; putative; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.950
DR_0405
Alpha-dextran endo-1,6-alpha-glucosidase; Similar to PID:2304776 PID:634093 percent identity: 63.45; identified by sequence similarity; putative; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.950
DR_1141
Glycosyl hydrolase, family 13; Similar to PID:1652891 percent identity: 67.92; identified by sequence similarity; putative.
  
 0.931
DR_0191
Glycogen debranching enzyme-related protein; Similar to GP:1857620 percent identity: 48.14; identified by sequence similarity; putative.
 
 
 0.907
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
  
 
 0.820
treZ
Maltooligosyltrehalose trehalohydrolase, putative; Similar to PID:1040697 percent identity: 56.74; identified by sequence similarity; putative; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.775
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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