Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DR_2201Conserved hypothetical protein; Similar to GP:3128259 percent identity: 61.07; identified by sequence similarity; putative. (155 aa)    
Predicted Functional Partners:
DR_A0242
Conserved hypothetical protein; Similar to SP:P21498 PID:537019 GB:U00096 PID:1790621 percent identity: 54.69; identified by sequence similarity; putative.
  
     0.737
DR_0215
Aminotransferase, class V; Similar to GP:3402253 percent identity: 55.47; identified by sequence similarity; putative.
 
  
 0.668
DR_2202
UDP-glucose 4-epimerase; Similar to GB:AE000666 percent identity: 68.52; identified by sequence similarity; putative; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.649
pyrF
Orotidine 5`-phosphate decarboxylase; Similar to PID:1754505 percent identity: 63.03; identified by sequence similarity; putative; Belongs to the OMP decarboxylase family. Type 2 subfamily.
       0.573
hmp
Flavohemoprotein; Similar to PID:1063247 SP:P49852 GB:AL009126 percent identity: 64.34; identified by sequence similarity; putative; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
     
 0.446
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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