Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DR_2255Hypothetical protein; Identified by Glimmer2; putative. (300 aa)    
Predicted Functional Partners:
DR_2254
Hypothetical protein; Identified by Glimmer2; putative.
       0.835
DR_2253
Conserved hypothetical protein; Similar to SP:P25747 GB:X62529 PID:405874 GB:U00096 PID:1788475 percent identity: 54.24; identified by sequence similarity; putative.
  
  
 0.679
DR_0685
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.529
DR_A0275
Cytochrome C6, putative; Similar to SP:O30881 percent identity: 43.53; identified by sequence similarity; putative.
   
  
 0.529
DR_1571
Peptide ABC transporter, periplasmic peptide-binding protein; Probably part of a binding-protein-dependent transport system.
      
 0.520
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
   
 
 0.416
Your Current Organism:
Deinococcus radiodurans
NCBI taxonomy Id: 243230
Other names: D. radiodurans R1, Deinococcus radiodurans R1, Deinococcus radiodurans str. R1
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